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Ocean Acidification: A Systems Approach to a Global Problem
Conditional Remix & Share Permitted
CC BY-NC
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In this curriculum module, students in high school life science, marine science, and/or chemistry courses act as interdisciplinary scientists and delegates to investigate how the changing carbon cycle will affect the oceans along with their integral populations.

The oceans cover 70 percent of the planet and play a critical role in regulating atmospheric carbon dioxide through the interaction of physical, chemical, and biological processes. As a result of anthropogenic activity, a doubling of the atmospheric CO2 concentration (to 760 ppm) is expected to occur by the end of this century. A quarter of the total CO2 emitted has already been absorbed by the surface oceans, changing the marine carbonate system, resulting in a decrease in pH, a change in carbonate-ion concentrations, and a change in the speciation of macro and micronutrients. The shift in the carbonate system is already drastically affecting biological processes in the oceans and is predicted to have major consequences on carbon export to the deep ocean with reverberating effects on atmospheric CO2. Put in simple terms, ocean acidification is a complex phenomenon with complex consequences. Understanding complexity and the impact of ocean acidification requires systems thinking – both in research and in education. Scientific advancement will help us better understand the problem and devise more effective solutions, but executing these solutions will require widespread public participation to mitigate this global problem.

Through these lessons, students closely model what is occurring in laboratories worldwide and at Institute for Systems Biology (ISB) through Monica Orellana’s research to analyze the effect CO2 has on ocean chemistry, ecosystems and human societies. Students experiment, analyze public data, and prepare for a mock summit to address concerns. Student groups represent key “interest groups” and design two experiments to observe the effects of CO2 on seawater pH, diatom growth, algal blooms, nutrient availability, and/or shell dissolution.

Subject:
Atmospheric Science
Physical Science
Material Type:
Module
Author:
Aisha McKee
Alexis Boleda
Alexis Valauri-Orton
Allison Lee Cusick
Anna Farrell-Sherman
Baliga Lab
Barbara Steffens
Claudia Ludwig
Danny Thomson
Dexter Chapin
Dina Kovarik
Donald Cho
Eric Grewal
Eric Muhs
Helen Ippolito
Holly Kuestner
Institute for Systems Biology
Jeannine Sieler
Jennifer Duncan-Taylor
Jia Hao Xu
JoAnn Chrisman
Jocelyn Lee
Kedus Getaneh
Kevin Baker
Mari Knutson Herbert
Megan DeVault
Meredith Carlson
Michael Walker
Monica V. Orellana
Nitin S. Baliga
Olachi Oleru
Raisah Vestindottir
Steven Do
Systems Education Experiences
William Harvey
Zac Simon
Date Added:
03/09/2023
Our Invisible Forest: What's in a Drop of Seawater?
Conditional Remix & Share Permitted
CC BY-NC
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Take a breath — where does the oxygen you inhaled come from? In our changing world, will we always have enough oxygen? What is in water that supports life? What is known? How do we know what we know about our vast oceans? These are just a few of the driving questions explored in this interactive STEAM high school curriculum module.

Students in marine science, environmental science, physics, chemistry, biology, integrated science, biotechnology and/or STEAM courses can use this curriculum module in order to use real-world, big data to investigate how our “invisible forest” influences ocean and Earth systems. Students build an art project to represent their new understanding and share this with the broader community.

This 4-week set of lessons is based on the oceanographic research of Dr. Anne Thompson of Portland State University in Oregon, which focuses on the abundant ocean phytoplankton Prochlorococcus. These interdisciplinary STEAM lessons were inspired by Dr. Thompson’s lab and fieldwork as well as many beautiful visualizations of Prochlorococcus, the ocean, and Earth. Students learn about the impact and importance of Prochlorococcus as the smallest and most abundant photosynthetic organism on our planet. Through the lessons, students act as both scientists and artists as they explore where breathable oxygen comes from and consider how to communicate the importance of tiny cells to human survival.

This module is written as a phenomenon-based, Next Generation Science Standards (NGSS) three-dimensional learning unit. Each of the lessons below also has an integrated, optional Project-Based Learning component that guides students as they complete the PBL process. Students learn to model a system and also design and evaluate questions to investigate phenomena. Students ultimately learn what is in a drop of ocean water and showcase how their drop contributes to our health and the stability and dynamics of global systems.

Subject:
Applied Science
Environmental Science
Material Type:
Module
Author:
Amanda Cope
Anne W. Thompson
Baliga Lab
Barbara Steffens
Claudia Ludwig
Emily Borden
Institute for Systems Biology
Jeannine Sieler
Linnea Stavney
Mari Knutson Herbert
Mark Buchli
Michael Walker
Nitin S. Baliga
Portland State University
Uzma Khalil
Date Added:
03/09/2023
Systems Are Everywhere
Conditional Remix & Share Permitted
CC BY-NC
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The “Systems Are Everywhere” module was originally written for high school science teachers or counselors to use in any setting (in class or in extracurricular programs). However, during field-testing, we found that many elementary and middle school teachers were able to use these lessons successfully with their students. The module is made up of three lessons that serve to foster students’ understanding of systems, systems models, and systems thinking at every level of learning and across many content areas. Blended throughout the lessons are career connections that will introduce students to diverse systems thinkers in STEM, and provide context for how systems approaches are used in real life to address complex problems. The lessons and module can be used as a stand-alone set of activities or can be integrated into any course as an extension or enrichment.

The module begins with students modeling a complex system. Students will brainstorm and sketch the parts and connections of the system, then use an online tool (Loopy) to model the interactions of those parts and connections. Next, students will develop their understanding of systems thinking skills and their application for addressing problems and solutions. Then, students will apply their knowledge and skills to model a system of their choosing. Lastly, they will showcase their skills by creating a student profile and integrating their systems thinking skills into a resume.

Target Audience
This is our introductory module that we recommend teaching before each of our other modules to give students a background in systems and to help them understand the many careers available in STEM. This module can be applied easily to any content area and works best as written for students between 6th and 12th grades but can be adapted for other ages. It works very well when teaching virtually and in-person. If you are looking for an introduction to systems that can be delivered in-person with more kinesthetic activities, please see our Introduction to Systems module. The Intro to Systems module works best with 8-12 grade students, though can be used with some modifications for 6-7th graders. This Systems are Everywhere module can work well for elementary through secondary grades.

Subject:
Life Science
Material Type:
Activity/Lab
Assessment
Homework/Assignment
Lesson
Lesson Plan
Module
Student Guide
Teaching/Learning Strategy
Unit of Study
Author:
Abigail Randall
Baliga Lab
Barbara Steffens
Claudia Ludwig
Eric Muhs
Institute for Systems Biology
Jennifer Eklund
Linnea Stavney
Michael Walker
Rachel Calder
Rebecca A. Howsmon
Stephanie Swegle
Systems Education Experiences
Yuna Shin
Date Added:
01/24/2023
The Unix Shell
Unrestricted Use
CC BY
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Software Carpentry lesson on how to use the shell to navigate the filesystem and write simple loops and scripts. The Unix shell has been around longer than most of its users have been alive. It has survived so long because it’s a power tool that allows people to do complex things with just a few keystrokes. More importantly, it helps them combine existing programs in new ways and automate repetitive tasks so they aren’t typing the same things over and over again. Use of the shell is fundamental to using a wide range of other powerful tools and computing resources (including “high-performance computing” supercomputers). These lessons will start you on a path towards using these resources effectively.

Subject:
Applied Science
Computer Science
Mathematics
Measurement and Data
Material Type:
Module
Provider:
The Carpentries
Author:
Adam Huffman
Adam James Orr
Adam Richie-Halford
AidaMirsalehi
Alex Kassil
Alex Mac
Alexander Konovalov
Alexander Morley
Alix Keener
Amy Brown
Andrea Bedini
Andrew Boughton
Andrew Reid
Andrew T. T. McRae
Andrew Walker
Ariel Rokem
Armin Sobhani
Ashwin Srinath
Bagus Tris Atmaja
Bartosz Telenczuk
Ben Bolker
Benjamin Gabriel
Bertie Seyffert
Bill Mills
Brian Ballsun-Stanton
BrianBill
Camille Marini
Chris Mentzel
Christina Koch
Colin Morris
Colin Sauze
Damien Irving
Dan Jones
Dana Brunson
Daniel Baird
Daniel McCloy
Daniel Standage
Danielle M. Nielsen
Dave Bridges
David Eyers
David McKain
David Vollmer
Dean Attali
Devinsuit
Dmytro Lituiev
Donny Winston
Doug Latornell
Dustin Lang
Elena Denisenko
Emily Dolson
Emily Jane McTavish
Eric Jankowski
Erin Alison Becker
Ethan P White
Evgenij Belikov
Farah Shamma
Fatma Deniz
Filipe Fernandes
Francis Gacenga
François Michonneau
Gabriel A. Devenyi
Gerard Capes
Giuseppe Profiti
Greg Wilson
Halle Burns
Hannah Burkhardt
Harriet Alexander
Hugues Fontenelle
Ian van der Linde
Inigo Aldazabal Mensa
Jackie Milhans
Jake Cowper Szamosi
James Guelfi
Jan T. Kim
Jarek Bryk
Jarno Rantaharju
Jason Macklin
Jay van Schyndel
Jens vdL
John Blischak
John Pellman
John Simpson
Jonah Duckles
Jonny Williams
Joshua Madin
Kai Blin
Kathy Chung
Katrin Leinweber
Kevin M. Buckley
Kirill Palamartchouk
Klemens Noga
Kristopher Keipert
Kunal Marwaha
Laurence
Lee Zamparo
Lex Nederbragt
M Carlise
Mahdi Sadjadi
Marc Rajeev Gouw
Marcel Stimberg
Maria Doyle
Marie-Helene Burle
Marisa Lim
Mark Mandel
Martha Robinson
Martin Feller
Matthew Gidden
Matthew Peterson
Megan Fritz
Michael Zingale
Mike Henry
Mike Jackson
Morgan Oneka
Murray Hoggett
Nicola Soranzo
Nicolas Barral
Noah D Brenowitz
Noam Ross
Norman Gray
Orion Buske
Owen Kaluza
Patrick McCann
Paul Gardner
Pauline Barmby
Peter R. Hoyt
Peter Steinbach
Philip Lijnzaad
Phillip Doehle
Piotr Banaszkiewicz
Rafi Ullah
Raniere Silva
Robert A Beagrie
Ruud Steltenpool
Ry4an Brase
Rémi Emonet
Sarah Mount
Sarah Simpkin
Scott Ritchie
Stephan Schmeing
Stephen Jones
Stephen Turner
Steve Leak
Stéphane Guillou
Susan Miller
Thomas Mellan
Tim Keighley
Tobin Magle
Tom Dowrick
Trevor Bekolay
Varda F. Hagh
Victor Koppejan
Vikram Chhatre
Yee Mey
csqrs
earkpr
ekaterinailin
nther
reshama shaikh
s-boardman
sjnair
Date Added:
03/20/2017