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Data Analysis and Visualization in R for Ecologists
Unrestricted Use
CC BY
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Data Carpentry lesson from Ecology curriculum to learn how to analyse and visualise ecological data in R. Data Carpentry’s aim is to teach researchers basic concepts, skills, and tools for working with data so that they can get more done in less time, and with less pain. The lessons below were designed for those interested in working with ecology data in R. This is an introduction to R designed for participants with no programming experience. These lessons can be taught in a day (~ 6 hours). They start with some basic information about R syntax, the RStudio interface, and move through how to import CSV files, the structure of data frames, how to deal with factors, how to add/remove rows and columns, how to calculate summary statistics from a data frame, and a brief introduction to plotting. The last lesson demonstrates how to work with databases directly from R.

Subject:
Applied Science
Computer Science
Ecology
Information Science
Life Science
Mathematics
Measurement and Data
Material Type:
Module
Provider:
The Carpentries
Author:
Ankenbrand, Markus
Arindam Basu
Ashander, Jaime
Bahlai, Christie
Bailey, Alistair
Becker, Erin Alison
Bledsoe, Ellen
Boehm, Fred
Bolker, Ben
Bouquin, Daina
Burge, Olivia Rata
Burle, Marie-Helene
Carchedi, Nick
Chatzidimitriou, Kyriakos
Chiapello, Marco
Conrado, Ana Costa
Cortijo, Sandra
Cranston, Karen
Cuesta, Sergio Martínez
Culshaw-Maurer, Michael
Czapanskiy, Max
Daijiang Li
Dashnow, Harriet
Daskalova, Gergana
Deer, Lachlan
Direk, Kenan
Dunic, Jillian
Elahi, Robin
Fishman, Dmytro
Fouilloux, Anne
Fournier, Auriel
Gan, Emilia
Goswami, Shubhang
Guillou, Stéphane
Hancock, Stacey
Hardenberg, Achaz Von
Harrison, Paul
Hart, Ted
Herr, Joshua R.
Hertweck, Kate
Hodges, Toby
Hulshof, Catherine
Humburg, Peter
Jean, Martin
Johnson, Carolina
Johnson, Kayla
Johnston, Myfanwy
Jordan, Kari L
K. A. S. Mislan
Kaupp, Jake
Keane, Jonathan
Kerchner, Dan
Klinges, David
Koontz, Michael
Leinweber, Katrin
Lepore, Mauro Luciano
Li, Ye
Lijnzaad, Philip
Lotterhos, Katie
Mannheimer, Sara
Marwick, Ben
Michonneau, François
Millar, Justin
Moreno, Melissa
Najko Jahn
Obeng, Adam
Odom, Gabriel J.
Pauloo, Richard
Pawlik, Aleksandra Natalia
Pearse, Will
Peck, Kayla
Pederson, Steve
Peek, Ryan
Pletzer, Alex
Quinn, Danielle
Rajeg, Gede Primahadi Wijaya
Reiter, Taylor
Rodriguez-Sanchez, Francisco
Sandmann, Thomas
Seok, Brian
Sfn_brt
Shiklomanov, Alexey
Shivshankar Umashankar
Stachelek, Joseph
Strauss, Eli
Sumedh
Switzer, Callin
Tarkowski, Leszek
Tavares, Hugo
Teal, Tracy
Theobold, Allison
Tirok, Katrin
Tylén, Kristian
Vanichkina, Darya
Voter, Carolyn
Webster, Tara
Weisner, Michael
White, Ethan P
Wilson, Earle
Woo, Kara
Wright, April
Yanco, Scott
Ye, Hao
Date Added:
03/20/2017
Introduction to Philosophy: Epistemology
Unrestricted Use
CC BY
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Short Description:
Introduction to Philosophy: Epistemology engages first-time philosophy readers on a guided tour through the core concepts, questions, methods, arguments, and theories of epistemology—the branch of philosophy devoted to the study of knowledge. The book progresses systematically while placing key ideas and thinkers in historical and contemporary context. Central topics include the analysis of knowledge, the nature of epistemic justification, rationalism vs. empiricism, skepticism, the value of knowledge, the ethics of belief, Bayesian epistemology, social epistemology, and feminist epistemologies. Cover art by Heather Salazar; cover design by Jonathan Lashley. Join the conversation about this and the other books in the Introduction to Philosophy textbook series.

Long Description:
Introduction to Philosophy: Epistemology engages first-time philosophy readers on a guided tour through the core concepts, questions, methods, arguments, and theories of epistemology—the branch of philosophy devoted to the study of knowledge. After a brief overview of the field, the book progresses systematically while placing central ideas and thinkers in historical and contemporary context.

The chapters cover the analysis of knowledge, the nature of epistemic justification, rationalism vs. empiricism, skepticism, the value of knowledge, the ethics of belief, Bayesian epistemology, social epistemology, and feminist epistemologies. Along the way, instructors and students will encounter a wealth of additional resources and tools: Chapter learning outcomes Key terms Images of philosophers and related art Useful diagrams and tables Boxes containing excerpts and other supplementary material Questions for reflection Suggestions for further reading A glossary

For an undergraduate survey epistemology course, Introduction to Philosophy: Epistemology is ideal when used as a main text paired with primary sources and scholarly articles. For an introductory philosophy course, select book chapters are best used in combination with chapters from other books in the Introduction to Philosophy series.

Word Count: 64081

ISBN: 978-1-989014-25-7

(Note: This resource's metadata has been created automatically by reformatting and/or combining the information that the author initially provided as part of a bulk import process.)

Subject:
Arts and Humanities
Philosophy
Material Type:
Textbook
Provider:
Rebus Community
Author:
Brian C. Barnett
Daniel Massey
Guy Axtell
Jonathan Lopez
K. S. Sangeetha
Monica C. Poole
Todd R. Long
William D. Rowley
Date Added:
08/16/2021
Online Readmission Review Tool and Curriculum Sample
Unrestricted Use
CC BY
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This online readmission review tool was designed to be used as part of an interprofessional readmission review curriculum that engaged medical residents, pharmacy residents, nurse practitioner students, early career nurses, and social work students in a critical analysis of readmissions. The tool was designed to contain critical components for readmission risk derived from several published evidence-based instruments. Also included is a sample of the instructions given to participants in this curriculum.

Subject:
Education
Material Type:
Activity/Lab
Teaching/Learning Strategy
Author:
Deepa Rani Nandiwada
Jennifer S. Myers
Mark Upton
Rachel K. Miller
Date Added:
11/27/2019
Pathology Case Study: A 58 year old woman with a corpus callosum nodule at autopsy
Read the Fine Print
Some Rights Reserved
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(This case study was added to OER Commons as one of a batch of over 700. It has relevant information which may include medical imagery, lab results, and history where relevant. A link to the final diagnosis can be found at the end of the case study for review. The first paragraph of the case study -- typically, but not always the clinical presentation -- is provided below.)

The patient was a 58-year-old African American woman with severe static encephalopathy and cerebral palsy both presumptively related to prenatal/perinatal brain injury. Additional neurological diagnoses included an ill-defined seizure history, bipolar affective disorder, and medication-related tardive dyskinesia. The patient's other co-morbidities were non-contributory. She was a permanent resident of a long-term care facility, where she expired unexpectedly. An autopsy was requested.

Subject:
Applied Science
Education
Health, Medicine and Nursing
Life Science
Material Type:
Case Study
Diagram/Illustration
Provider:
University of Pittsburgh School of Medicine
Provider Set:
Department of Pathology
Author:
M. Beatriz S. Lopes
Ph.D.
Susanne K. Jeffus
T. David Bourne
Date Added:
08/01/2022
Practical Considerations for Navigating Registered Reports
Unrestricted Use
CC BY
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Practical Considerations for Navigating Registered Reports

Subject:
Education
Material Type:
Reading
Author:
Albers C
Button K S
Chambers C D
Helen Wills Neuroscience Institute University Of California Berkeley Ca Usa
Jason M
Jscimeca Berkeley Edu
Kiyonaga Berkeley Edu
Lakens D
Nosek B A
Poldrack R A
Date Added:
12/21/2021
Principles of Management
Unrestricted Use
CC BY
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Principles of Management is designed to meet the scope and sequence requirements of the introductory course on management. This is a traditional approach to management using the leading, planning, organizing, and controlling approach. Management is a broad business discipline, and the Principles of Management course covers many management areas such as human resource management and strategic management, as well behavioral areas such as motivation. No one individual can be an expert in all areas of management, so an additional benefit of this text is that specialists in a variety of areas have authored individual chapters.

Subject:
Business and Communication
Management
Material Type:
Textbook
Provider:
Rice University
Provider Set:
OpenStax College
Author:
Amit Shah
Anastasia H. Cortes
David S. Bright
Donald G. Gardner
Eva Hartmann
James S. O’Rourke
Jason Lambert
Jeffrey Muldoon
Jon L. Pierce
Joseph Weiss
Joy Leopold
K. Praveen Parboteeah
Laura M. Leduc
Margaret A. White
Monique Reece
Siri Terjesen
Date Added:
06/28/2019
Surface area and volume of Cube
Conditional Remix & Share Permitted
CC BY-NC-SA
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Here they learn Total Surface area, Lateral SUrface ARea and volume of Cube

Subject:
Mathematics
Material Type:
Lesson
Author:
Suchetha S S
K S Gireesh
Date Added:
01/15/2020
Topics in Sustainable Community Development
Conditional Remix & Share Permitted
CC BY-NC
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Long Description:
CREDITS:

Cover Photo by Darwis Alwan from Pexels

Word Count: 5321

(Note: This resource's metadata has been created automatically by reformatting and/or combining the information that the author initially provided as part of a bulk import process.)

Subject:
Applied Science
Architecture and Design
Career and Technical Education
Environmental Studies
Material Type:
Textbook
Author:
Alsha Paul
Ayse Berina Sumer Bolaji Komolafe Geraldine Cortes
Celina Rosario Poco Michel Marroqu N Ian Muldong H H
Ekta J H
Ilse Fick
Julie Anne Salas Tammy Cunningham Christian Brazel
K S
Kendra J
S A
Stanton Victoria Moedano Marco Sardea Ka-jahna Berry Somi
Date Added:
12/30/2021
A call for transparent reporting to optimize the predictive value of preclinical research
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Deficiencies in methods reporting in animal experimentation lead to difficulties in reproducing experiments; the authors propose a set of reporting standards to improve scientific communication and study design. The US National Institute of Neurological Disorders and Stroke convened major stakeholders in June 2012 to discuss how to improve the methodological reporting of animal studies in grant applications and publications. The main workshop recommendation is that at a minimum studies should report on sample-size estimation, whether and how animals were randomized, whether investigators were blind to the treatment, and the handling of data. We recognize that achieving a meaningful improvement in the quality of reporting will require a concerted effort by investigators, reviewers, funding agencies and journal editors. Requiring better reporting of animal studies will raise awareness of the importance of rigorous study design to accelerate scientific progress.

Author:
Amelie K. Gubitz
Chris P. Austin
David W. Howells
Dimitri Krainc
Eileen W. Bradley
Ellis Unger
Howard E. Gendelman
Howard Fillit
John D. Porter
John Huguenard
John L. Goudreau
John M. McCall
Kalyani Narasimhan
Katrina Kelner
Khusru Asadullah
Linda J. Noble
Malcolm R. Macleod
Marc Fisher
Michael S. Levine
Oswald Steward
Richard T. Moxley III
Robert A. Gross
Robert B. Darnell
Robert Finkelstein
Robert J. Ferrante
Robert M. Golub
Robi Blumenstein
Ronald G. Crystal
Shai D. Silberberg
Sharon E. Hesterlee
Stanley E. Lazic
Steve Perrin
Story C. Landis
Susan G. Amara
Ursula Utz
Walter Koroshetz
Date Added:
08/08/2020
datacarpentry/semester-biology: v4.1.0 - Journal of Open Source Education Submission
Unrestricted Use
CC BY
Rating
0.0 stars

Data Carpentry for Biologists is a set of teaching materials for teaching biologists how to work with data through programming, database management and computing more generally.

This repository contains the complete teaching materials (excluding exams and answers to assignments) and website for a university style and self-guided course teaching computational data skills to biologists. The course is designed to work primarily as a flipped classroom, with students reading and viewing videos before coming to class and then spending the bulk of class time working on exercises with the teacher answering questions and demoing the concepts.

More information can be found on the project's GitHub page: https://github.com/datacarpentry/semester-biology/tree/v4.1.0

Subject:
Applied Science
Biology
Information Science
Life Science
Material Type:
Full Course
Lecture Notes
Primary Source
Author:
Andrew J
David J
Ethan P
Kristina Riemer
Morgan Ernest
S K
Sergio Marconi
Virnaliz Cruz
Zachary T
Date Added:
01/04/2022