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LOCATE: a mouse protein subcellular localization database

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Author:
Subject:
Science and Technology
Institution Name:
SciVee
Collection:
SciVee
Grade Level:
Post-secondary
Abstract:

We present here LOCATE, a curated, web-accessible database that houses data describing the membrane organization and subcellular localization of proteins from the FANTOM3 Isoform Protein Sequence set. Membrane organization is predicted by the high-throughput, computational pipeline MemO. The subcellular locations of selected proteins from this set were determined by a high-throughput, immunofluorescence-based assay and by manually reviewing >1700 peer-reviewed publications. LOCATE represents the first effort to catalogue the experimentally verified subcellular location and membrane organization of mammalian proteins using a high-throughput approach and provides localization data for ~40% of the mouse proteome.

Languages:
English
Media Format:
Audio
Conditions of Use:
Creative Commons Attribution 3.0
Creative Commons Attribution 3.0

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